IDBv1 SNP chip (International Beef and Dairy)
|
|
|
- Kerrie Curtis
- 5 years ago
- Views:
Transcription
1 Matthew McClure
2 IDBv1 SNP chip (International Beef and Dairy) 17K chip, LD base Diseases Parentage Validation Imputation for Parentage 2013: 27,600 Irish cattle 2
3 IDBv2 18K chip 17K chip, LD base March, 2014 Diseases-increased Parentage Validation Imputation-improved BLAD_Bovine_Leukocyte_Adhesion_Deficiency BY_Brachyspina Citrullinaemia CMD1_Congenital_muscular_dystonia_1 CMD2/Startle_Disease Crooket_tail_syndrome CVM_Complex_Vertebral_Malformation Dilutor_3bp Diseases Dun_Dexter Mulefoot-Syndactyly NH_Neuropathic_hydrocephalus Osteopetrosis PHA1_Pulmonary_hypoplasis_with_anascarca PHA2_Pulmonary_hypoplasis_with_anascarca Protoporphyria Tibial_Hemimelia-TH_Improver Major Genes A1/A2_beta-casein,_"A2_corp" Myostatin_MSTN1-nt821DEL11 Myostatin_MSTN2-F94L Myostatin_MSTN4-Q204X Myostatin_MSTN5-E226X Myostatin_MSTN6-C313Y Myostatin_MSTN7-S105C 3
4 IDBv2 Needs Validation Diseases Agouti_colour Dwarfism_BD2_Dexter Multiple_ocular_defects_2 Alpha_Mannosidosis_662_Galloway Dwarfism_growth_hormone_deficiency_Brahman Myasthenic_syndrome_congenital Alpha_Mannosidosis_961_Angus Epidermolysis_bullosa Myoclonus Anhidrotic_ectodermal_dysplasia Epidermolysis_bullosa_dystrophic Neuronal_ceroid_lipofuscinosis Arachnomelia_Syndrome-SAA_Serum_Amyloid-A-MOCS1_gene Factor_XI Perinatal_weak_calf_syndrome Arachnomelia_Syndrome-SUOX_gene Forelimb_girdle_muscular_anomaly PinkEye Axonopathy Goitre_familial PMT_pseudomyotonia_con_chianina Beta_Mannosidosis Haemophilia_A PMT_pseudomyotonia_con_romagnola_1 Brachyspina1 Heterochromia_Irides PMT_pseudomyotonia_con_romagnola_2 Brachyspina2 HH1_decreased_reproductive_efficiency Polled_Celtic Cardiomyopathy_and_woolly_haircoat_syndrome HH3_decreased_reproductive_efficiency Polled_Holstein Cardiomyopathy_dilated HH4_decreased_reproductive_efficiency RNF11_growth_retardation_ Chediak_Higashi_syndrome Hypotrichosis1 Scurs_type2 Chondrodysplasia_1 Hypotrichosis2 Scurs-TWIST1 Chondrodysplasia_2 Ichthyosis_congenita SDM_Spinal_dysmyelination Coat_colour_albinism IE_Idiopathic_Epilepsy Silver_Char_Dilutor Coat_colour_Black JH1_decreased_reproductive_efficiency SilverColorDilutor1 Coat_colour_dilution Cogenital Paunch Calf Syndrome SilverColorDilutor2 Coat_colour_dilution-PMel17 Maple_Syrup_Hereford SMA_spinal_muscular_atrophy Coat_colour_Red_factor Marfan_syndrome Spherocytosis Colour_Dilutor_SNP MH1_abortion Thrombopathia Dominant_white_with_bilateral_deafness MH2_abortion Trimethylaminuria_fishy_flavor DUMPS_deficiency_uridine_monophosphate_synthase Mucopolysaccharidosis_IIIB Weaver_Syndrome Dwarfism_Angus Mulefoot Xanthinuria_type_II Dwarfism_BD1_Dexter Multiple_ocular_defects_1 Yellow_fat Major Genes ABCG2 Growth_Hormone_GH2291 Myostatin_MSTN-nt Calpain1_CAPN1_530 Growth_Hormone_GH-F279YMyostatin_MSTN-nt Calpastain_CAST_2959 LALBA_Lactose_synthase_B Myostatin_MSTN-nt387 Calpastain_CAST-2870 LGB_beta-lactoglobulin_pre Myostatin_MSTN-nt414 CSN2_beta_casein Myostatin_MSTN3a-nt419 Myostatin_MSTN-nt747+7 CSN2_kappa_casein_2 Myostatin_MSTN8-D182N Myostatin_MSTN-nt CSN3_kappa_casein Myostatin_MSTN9-E291X STAT1 Ferrochelatase Myostatin_MSTN-nt267 STAT3 Growth_Hormone_GH_2141 Myostatin_MSTN-nt324 STAT5 Growth_Hormone_GH_2291 Myostatin_MSTN-nt TG5_Thyroglobulin 4
5 National Genetic Disease Overview Citrullinaemina <1% DUMPs 0% CVM-4% Branchspina-2% Curly Calf 0% Mulefoot <1% Osteopetrosis <1%
6 Irish Parent Verification Process Certificate Issued Herdbook Rules Applied Failed Verified Failed Verified Weatherbys ICBF Database Hair Roots
7 Microsatellite Imputation Infer MS from SNP Haplotype Genotyped ONCE
8 Microsatellite Imputation Initial reference population: SNP + ISAG MS genotypes 7,076 Bos taurus 1,008 B. indicus 39 pure breeds Breed SNP SNP+MS Abondance Angus Aubrac Ayshire Bazadaise Beefmaster Belmont Red 40 Belgian Blue Blonde D'Aquitain Brahman Brangus Braunvieh Bretonne Pie Noire Brown Swiss Brune Des Alpes Charolais Chiangus 19 0 Crossbred Devon Dexter Fresian Gasconne Gelbvieh 44 0 Gir Guernsey Hereford Holstein Jersey Kerry 1 0 Limousin Longhorn Maine Anjou Montbeliarde Murray Grey 22 N'Dama 24 0 Nelore Normande Parthenaise Pie Rouge Des Plaines Piedmontese Red Angus Red Pie (italial) 2 0 Romagnola Rouge Flamande Salers Santa Gertrudis 99 0 Sheko 18 0 Shorthorn Simmental Swedish Red 12 9 Tarentaise Tropical Composite 336 Vosgienne Watusi TOTAL
9 Microsatellite Imputation -Beagle used PHASE + Haplotype. Angus Ayshire BelgianBlue Charolais Guernsey Hereford Holstein Jersey Limousin RedAngus Shorthorn Simmental Overall AAABABBAABBAABABBBBBAABBAAABBAAAA BBBBBAAAABBAABABBBBAABAABAABAAABA. 262 AABBBABBAAABBABAAABAABAABAABAAABA BBBBBAAAABBAABABBBBAABAABAABBAAAA AABBABAAABBAABABBBBBAABBAABABABAA AABBBABBABABBABAAABBAAABAAABBAAAA. 286 AABBBABBABABBABAAABBAABBAAABBAAAA AABBABBAABBAABABBBBBAABBAABABABAA AABBABBAABBAABABBBBBBABBAABBAABAA. 268 BBBBBAAAABBAABABBBBBAABBBAABBAABA AABBABBAABBAABABBBBBAABBAAABBAAAA AABBBABBABABBABAAABBABAABAABBAAAA AAABABBAABBAABABBBBBAABBAAABBAAAA AAABBABBABABBABAAAAAABAABAABABBAA AABBABBAABBAABABBBBBAABBAAABBAAAA AAABABAAABBAABABBBBBAABBAAABBAAAA AAABABBAABBAABABBBBBAABBAAABBAAAA AAABABBAABBAABABBBABABAABAABABBAA AABBBABBAAABBABAAABAABBABAABBAABA AABBBABBABABBABAAAABAABBAABABAABA BM / SNP 8,483 Reference Pop
10 Irish Parent Verification Process Verified Certificate Issued Herdbook Rules Applied Failed Verified Failed Verified Weatherbys ICBF Database Hair Roots
11 Microsatellite Imputation Accuracy TGLA53 Dropped Haplotype Size Increased 11
12 ddition use for Microsatellite Imputation Correcting Human Error Bull DNA sent for HD Hillcrest Jerome Lorabar Mighty Prince Thrunton Unstoppable Hillcrest Champion Curaheen Tyson Woodhall Dynamite Sacombe Wishful Thinking Jupiter (JPR) Blakestown Artiste (BZT) Hurtig Fleckvigh Dovea Napoleon (NAP) Paulern Ulysses Maine Dragon Fieldson Alfy Friarstown Edition Freetown Regent Exodus Rainbow Hills Independence 46X BUT Bellman Of Knockadrinan MS matches to Hillcrest Jerome Thrunton Unstoppable Maine Dragon (FT) Lorabar Mighty Prince D113 (FT) Hillcrest Champion Curaheen Tyson Woodhall Dynamite Jupiter (CH) Blakestown Artiste Hurtig Dovea Napoleon Dovea Napoleon Paulern Ulysses Fieldson Alfy Friarstown Edition G028 Friarstown Edition G028 No match found No match found No match found No match found 12
13 mpact of Microsatellite Imputation >11,000 MS imputed Irish animals (May, 2014) SNP parentage failed (small #) Embryo transfer animal No SNP genotype on sire (most of them) Saved Irish cattle farmers > 220,000 MS genotyping ~ 20/animal >98% accuracy 2+ misconcordances = MS genotyped
14 Parentage SNP Imputation?
15 Parentage SNP Imputation >99% accuracy? 15
16 Parentage SNP Imputation >35,600 animals FImpute2 used # Offspring 8 balanced groups 501 Sires SNP density 3 levels SNP imputed ISAG core 1980 Common SNP All Animals Imputed Sires Breed LD IDB 50K HD Total AAN 79 1, , AUB AYS BAQ BBL BRF CHA 10 3,790. 1,016 4, DNR HER 1 1, , HOL 2,745 12,721 3, , IRM JER KER LIM 119 3,983. 1,030 5, MON MRY MSH NWR PAR PIE RBT SAL SIM , SWR
17 Parentage SNP Imputation Results 17
18 Most imputation errors are BB/AA where the sire is A/B 18
19 MS-SNP Imputation 2-step--Proposal MS Impute ISAG Core SNP Impute Parentage Prediction SNP Impute 19
20 Thank you <1990 s Present Future
21 2K a 3K LD Parentage SNP b Progeny c Ave d STD e Wrong f Ave STD Wrong Ave STD Wrong 2K 8 to to to to to to to ISAG core 8 to to to to to to to
2017 Breeding Heifer Validation Program Major Livestock Show Breed Eligibility Guide
This document is only to serve as a resource for determining the eligibility of specific breeds at major livestock shows. This is not a complete list of breeds eligible and livestock shows reserve the
Accuracy of genome-wide imputation in Braford and Hereford beef cattle
Piccoli et al. BMC Genetics (2014) 15:157 DOI 10.1186/s12863-014-0157-9 RESEARCH ARTICLE Open Access Accuracy of genome-wide imputation in Braford and Hereford beef cattle Mario L Piccoli 1,2,3, José Braccini
THURSDAY 19th January 2017 At 11.00am
CATALOGUED SALE OF 320 STORE CATTLE BEEF TYPE COWS/HEIFERS IN OR WITH CALVES STOCK BULLS 35 FEEDING BULLS 12 BARREN & FEEDING COWS THURSDAY 19th January 2017 At 11.00am Correct at time of going to press
THURSDAY 15th NOVEMBER 2018 At 11.00am
CATALOGUED SALE OF 500 STORE CATTLE CONTINENTAL & NATIVE BRED BEEF TYPE COWS/HEIFERS WITH AND IN CALF 2 STOCK BULLS FEEDING BULLS 10 BARREN COWS THURSDAY 15th NOVEMBER 2018 At 11.00am Correct at time of
THURSDAY 7th FEBRUARY 2019 At 11.00am
CATALOGUED SALE OF 450 STORE CATTLE TO INCLUDE SEVERAL ANNUAL DRAFTS OF QUALITY CONTINENTAL CROSS STEERS & HEIFERS BEEF TYPE COWS/HEIFERS WITH AND IN CALF STOCK BULLS Pedigree Blue - 7 years Pedigree Limousin
THURSDAY 4th OCTOBER 2018 At 11.00am
CATALOGUED SALE OF 650 STORE CATTLE CONTINENTAL & NATIVE BRED Including autumn show & sale of CONTINENTAL CROSS STORE CATTLE BEEF TYPE COWS/HEIFERS WITH AND IN CALF STOCK BULLS FEEDING BULLS BARREN COWS
WEEKLY SALES NEWS STOCK SOLD DURING THE WEEK. Prime Sheep 1866 Store Cattle 378 Prime Cattle 251
THAME FARMERS AUCTION MART LTD w/e MONDAY 4 TH JUNE 2018 WEEKLY SALES NEWS STOCK SOLD DURING THE WEEK Prime Sheep 1866 Store Cattle 378 Prime Cattle 251 PLEASE NOTE FOSCOTE MARKET WILL OPERATE ON A FOTNIGHTLY
Ocala Bull Sale Changes Date & Adds Quality Replacement Heifers
Ocala Bull Sale Changes Date & Adds Quality Replacement Heifers The 59 th Annual Ocala Bull Sale will be held at noon on Wednesday, October 29, 2014 at the Southeastern Livestock Pavilion in Ocala. Quality
Accuracy of imputation using the most common sires as reference population in layer chickens
Heidaritabar et al. BMC Genetics (2015) 16:101 DOI 10.1186/s12863-015-0253-5 RESEARCH ARTICLE Open Access Accuracy of imputation using the most common sires as reference population in layer chickens Marzieh
THURSDAY 18th APRIL 2019 At 11.00am
CATALOGUED SALE OF 1000 STORE CATTLE INCLUDING COWS IN OR WITH CALF 1 STOCK BULL 120 FEEDING BULLS 35 BARREN COWS THURSDAY 18th APRIL 2019 At 11.00am Correct at time of going to press 11/04/2019 4:25 PM
Sweden Description of Milk recording
Sweden Description of Milk recording 2011-07-15 Recording system and methods Method B4 according to ICAR. A4 is possible but not requested by farmers. Appen dix Organization Swedish Dairy Association is
Consequences of splitting whole-genome sequencing effort over multiple breeds on imputation accuracy
Bouwman and Veerkamp BMC Genetics 2014, 15:105 RESEARCH ARTICLE Open Access Consequences of splitting whole-genome sequencing effort over multiple breeds on imputation accuracy Aniek C Bouwman * and Roel
WEDNESDAY 6 TH SEPTEMBER 17 SALE TIME: APRROX NOON (FOLLOWING SALE OF DAIRY 11.00AM) SPECIAL SALE OF 215 SUCKLERS
Auctioneers: Cooper & Tanner, Symonds & Sampson WEDNESDAY 6 TH SEPTEMBER 17 SALE TIME: APRROX 12.00 NOON (FOLLOWING SALE OF DAIRY CATTLE @ 11.00AM) SPECIAL SALE OF 215 SUCKLERS COMPRISING GENUINE DISPERSAL
Comparison of three methods of packaging for the ageing/maturation of beef
Comparison of three methods of packaging for the ageing/maturation of beef (dry ageing, ageing in a permeable vacuum pack and standard vacuum packaging) Report prepared by Kim Matthews EBLEX (A division
Recipes BUNNY IN A CUP
Like Us on Facebook BUNNY IN A CUP 1 You will need: 2 Cups Cold Milk 1 Package (3.4 Ounces) Instant Vanilla Pudding Mix 2 Twists Black Licorice ¼ Cup Vanilla Frosting Red Liquid or Paste Food Coloring
WEEKLY SALES NEWS STOCK SOLD DURING THE WEEK. Prime Sheep 1157 Store Cattle 532 Prime Cattle 233
THAME FARMERS AUCTION MART LTD w/e MONDAY 10 TH OCTOBER 2016 WEEKLY SALES NEWS STOCK SOLD DURING THE WEEK Prime Sheep 1157 Store Cattle 532 Prime Cattle 233 MONDAY 24 TH OCTOBER 2016 WINSLOW @ FOSCOTE
Error rate for imputation from the Illumina BovineSNP50 chip to the Illumina BovineHD chip
Schrooten et al. Genetics Selection Evolution 2014, 46:10 Genetics Selection Evolution RESEARCH Open Access Error rate for imputation from the Illumina BovineSNP50 chip to the Illumina BovineHD chip Chris
Japan Consumer Trial Results
Japan Consumer Trial Results MLA Seminars, January 2007 1 Japanese Trial Consumer Objectives Evaluate the sensory response of Japanese consumers Evaluate responses across a full quality range x three cooking
TUESDAY 4 th DECEMBER 2018 CATALOGUE SALE 100 WEANLINGS
SHREWSBURY AUCTION CENTRE TUESDAY 4 th DECEMBER 2018 CATALOGUE SALE 100 WEANLINGS Charolais Steers and Heifers from ETO Jones, Llandrindod Wells To Include COWS & CALVES, STOCK BULL & YOUNG BULLS SALE
Temple Frieze from Iraq 2500 BCE. Outline. Evolution of Lactase Persistence. Domesticated Cattle. Prehistory of dairying
Outline Evolution of Lactase Persistence Alan R. Rogers March 27, 2016 History of dairying Lactose and lactase Dairying without lactase Domesticated Cattle Prehistory of dairying Earliest fossils: 8000
The AUSTRALIAN. Beef
The AUSTRALIAN Beef Compendium Contents Beef in Australia 2 Every step of the way 7 Cattle Breeds 12 Beef grading systems 22 Processing 37 Selling beef 43 Beef cuts and utilisation 47 Cooking techniques
EXETER LIVESTOCK CENTRE FRIDAY 29 th SEPTEMBER 2017 Approx 12.30pm - Ring 2
EXETER LIVESTOCK CENTRE FRIDAY 29 th SEPTEMBER 2017 Approx 12.30pm - Ring 2 MONTHLY CATALOGUED SALE OF 89 SUCKLER COWS & CALVES, IN-CALF COWS, BULLS AND FOLLOWERS EXETER LIVESTOCK CENTRE Matford Park Road,
WP Board 1054/08 Rev. 1
WP Board 1054/08 Rev. 1 9 September 2009 Original: English E Executive Board/ International Coffee Council 22 25 September 2009 London, England Sequencing the genome for enhanced characterization, utilization,
March The newborn calf 3/14/2016. Risks and Benefits of Milk vs. Milk Replacers for. Low milk prices???? Incentive to lower SCC?
March 2016 Risks and Benefits of Milk vs. Milk Replacers for Low milk prices???? Incentive to lower SCC? Divert milk from high SCC cows to feed calves? Robert James, Dept. of Dairy Science Department of
CHAROLAIS STYLE GUIDE
CHAROLAIS STYLE GUIDE 1 Brand identity...3 Logo...4 Colours...5 Fonts...6 Graphic elements...8 Contents Stationery...10 Advertising...11 Marketing materials... 14 Do s and don ts...17 Approval
Spring Charolais. sire summary
Charolais sire summary P R E F A C E Robert E. Williams, Ph.D. Director of Breed Improvement and Foreign Marketing American-International Charolais Association On behalf of of the the American-International
Gene frequencies in the blood group systems
Note Gene frequencies in the blood group systems of the Cuban Charolais Miriam RIBAS Inslituto de Ciencia Animal, Apartado 24, San Jose de Las Lajas, La Habana, Cuba Summary A total of 223 dam-son pairs
Att anläggningen uppfyller samtliga krav i checklistan nedan skall anges i kontrollrapporten. 1.0 Identification and traceability records Approved
Checklist to ensure compliance with Japanese EVP rules. This EVP describes the standards that slaughterhouses and processing facilities shall meet in producing beef and beef offal for export to Japan in
Fall Charolais. Sire Summary
Charolais Sire Summary P R E F A C E Robert E. Williams, Ph.D. Director of Breed Improvement and Foreign Marketing American-International Charolais Association On behalf of the American-International Charolais
Orkney Auction Mart Ltd
BULLS Orkney Auction Mart Ltd Catalogue of Breeding Stock Monday 23 rd May, 2016 Charolais W R Baillie & Co, Biggings, Toab Pens F4-5; F2-3 1. Baillieston Jester UK523769 403148 - Born 26 th May, 2014
Adventures in Dairyland
Adventures in Dairyland MEMBER'S MANUAL A project for 4-H school clubs and first year 4-H members who may or may not own or be able to own a calf. Virginia *~~ Coop~rative...,.. Extension Virginia Tech
HOLSWORTHY MARKET Wednesday 31 st October 2018
HOLSWORTHY MARKET Wednesday 31 st October 2018 Dispersal Sale of South Devon & Charolais Breeding Cattle on behalf of Messrs PRT & M Balsdon removed from Patchacott Farm, Beaworthy Auctioneer: David Kivell
KNIGHTON SOUTH SHROPSHIRE POWYS BORDER
KNIGHTON SOUTH SHROPSHIRE POWYS BORDER The Home of Quality Store Stock FRIDAY 7 th SEPTEMBER 2018 Sale of Store Cattle at 11.00am www.mccartneys.co.uk Knighton Market: 01547 528621 Wylcwm House, Knighton,
3 RD AUTUMN CATALOGUED SHOW & SALE OF 516 SUCKLED CALVES
EXETER LIVESTOCK CENTRE FRIDAY 16 TH NOVEMBER 2018 11.30am Ring 2 3 RD AUTUMN CATALOGUED SHOW & SALE OF 516 SUCKLED CALVES Kindly sponsored by:- Judge:- Mr Peter Edwards of Wellington EXETER LIVESTOCK
GOOSE, WILD TURKEY & PHEASANT
REQUIREMENTS: the right to refuse any wild game that does not smell fresh or is not cleaned properly. All wild game must be transported in clean, clear food grade bags/containers. We will not accept wild
KNIGHTON SOUTH SHROPSHIRE POWYS BORDER
KNIGHTON SOUTH SHROPSHIRE POWYS BORDER The Home of Quality Store Stock TUESDAY 8 th NOVEMBER 2016 Sale to commence at 11.00am www.mccartneys.co.uk Knighton Market: 01547 528621 Wylcwm House, Knighton,
AICA President Lee Eaton, Eaton Charolais, Lindsay, Mont.
AICA President Lee Eaton, Eaton Charolais, Lindsay, Mont. Years in the Charolais business: Since 1965 AICA membership has an excellent position in the cattle business. AICA has been out front in services
of Vitis vinifera using
Characterisation of the pan-genome of Vitis vinifera using Next Generation Sequencing Plant Biology Europe 2018 - June 18-21 - Copenhagen Gabriele Magris (gmagris@appliedgenomics.org) Genetic variation
Imputing rare variants in families using a two-stage approach
The Author(s) BMC Proceedings 2016, 10(Suppl 7):48 DOI 10.1186/s12919-016-0032-y BMC Proceedings PROCEEDINGS Open Access Imputing rare variants in families using a two-stage approach Samantha Lent *, Xuan
Name Today s Date. A Mad. A Gulp. B Angered. B Nibble. C Surprised. C Choke. D Poised. D Starve
Name Today s ate airy g Mag - Vocabulary Using ontext lues to etermine Meaning irections: Read the paragraph. Find the word that fits best in each numbered blank. Taken from It s isgusting and We te It!
About SC Fundraisers. *to read more about private label options, see page 4
About SC Fundraisers How we Got Started Silver Cup Coffee has been roasting award-winning coffee since 1995, but we have always chosen to keep our secret blends under the radar of the retail world, selling
FALL GRADE. Edible SCHOOL GARDEN. Program WORKBOOK STUDENT: VERSION: AUGUST 2016 JHU CAIH
3 FALL GRADE Edible SCHOOL GARDEN Program WORKBOOK STUDENT: VERSION: AUGUST 2016 JHU CAIH The Champion Cheer! We drink WATER cause it s fun, feels good, and makes us strong! We enjoy FRUITS AND VEGGIES
30 Rebecca Street, Stratford October 2015 Issue KNOWLEDGE + ACTION = POWER
30 Rebecca Street, Stratford 519 271 0388 October 2015 Issue KNOWLEDGE + ACTION = POWER October is non-gmo Month Non-GMO Month - The Non-GMO Project Celebrates Increased Awareness about Non-GMO Choices!
CAMPYLOBACTER IN MILK ( OR: CHERCHEZ LES CAMPYLOBACTERS IN MILK ) Eva Olsson Engvall
CAMPYLOBACTER IN MILK ( OR: CHERCHEZ LES CAMPYLOBACTERS IN MILK ) Eva Olsson Engvall 12th EURL Campylobacter workshop Nantes, France, 14-15 September, 2017 WHY SAMPLE MILK? Outbreak situations, search
Method for the imputation of the earnings variable in the Belgian LFS
Method for the imputation of the earnings variable in the Belgian LFS Workshop on LFS methodology, Madrid 2012, May 10-11 Astrid Depickere, Anja Termote, Pieter Vermeulen Outline 1. Introduction 2. Imputation
Development of an efficient machine planting system for progeny testing Ongoing progeny testing of black walnut, black cherry, northern red oak,
HTIRC Tree Improvement Accomplishments over the last five-years 2011-2015 by, Jim McKenna M.S. Operational Tree Breeder, USDA-FS-NRS-14 Development of an efficient machine planting system for progeny testing
Reasons for the study
Systematic study Wittall J.B. et al. (2010): Finding a (pine) needle in a haystack: chloroplast genome sequence divergence in rare and widespread pines. Molecular Ecology 19, 100-114. Reasons for the study
272 CATTLE SOLD THIS WEEK
Week Ending 24 th October 2018 272 CATTLE SOLD THIS WEEK Lincoln Red Bulls to 3000Gns Lincoln Red In calf Heifers to 3000Gns Lincoln Red Maiden Heifers to 3000Gns Young Bulls to 215.5-1667.92 OTMS to 175.5p
FALL GRADE. Edible SCHOOL GARDEN. Program WORKBOOK ANSWER KEY VERSION: AUGUST 2016 JHU CAIH
3 FALL GRADE Edible SCHOOL GARDEN Program WORKBOOK ANSWER KEY VERSION: AUGUST 2016 JHU CAIH The Champion Cheer! We drink WATER cause it s fun, feels good, and makes us strong! We enjoy FRUITS AND VEGGIES
Developing Machine-Harvestable Fresh Market Tomatoes; and other Highlights from the UF Breeding Program
Developing Machine-Harvestable Fresh Market Tomatoes; and other Highlights from the UF Breeding Program S.F. Hutton, J.W. Scott, B.M. Santos 813-633-4137 sfhutton@ufl.edu Comparison of once-over harvest
Genetic Transformation and Transgenic Plant Recovery from Vitis Species
Genetic Transformation and Transgenic Plant Recovery from Vitis Species Sadanand Dhekney, Zhijian T. Li & Dennis J. Gray Mid Florida Research & Education Center Apopka, FL 32703 Rationale for Genetic Transformation
Accuracy of imputation to whole-genome sequence data in Holstein Friesian cattle
van Binsbergen et al. Genetics Selection Evolution 2014, 46:41 Genetics Selection Evolution RESEARCH Accuracy of imputation to whole-genome sequence data in Holstein Friesian cattle Rianne van Binsbergen
Construction of a Wine Yeast Genome Deletion Library (WYGDL)
Construction of a Wine Yeast Genome Deletion Library (WYGDL) Tina Tran, Angus Forgan, Eveline Bartowsky and Anthony Borneman Australian Wine Industry AWRI Established 26 th April 1955 Location Adelaide,
Sugar Cane By C. Babu
Sugar Cane By C. Babu If searching for the book by C. Babu Sugar Cane in pdf format, in that case you come on to right website. We present the full edition of this book in epub, PDF, doc, txt, DjVu formats.
Draft Concept Paper for Coconut Research and Development in the South Pacific
Draft Concept Paper for Coconut Research and Development in the South Pacific COGENT Steering Committee Meeting Bangkok Thailand, June 2002 Introduction The South Pacific Island nations are collectively
Comparing performance of modern genotype imputation methods in different ethnicities
Comparing performance of modern genotype imputation methods in different ethnicities Nab Raj Roshyara 1,2, Katrin Horn 1, Holger Kirsten 1,2,3, Peter Ahnert 1,2 and Markus Scholz 1,2 1. Institute for Medical
Combining high throughput genotyping and phenotyping for the genetic improvement of table grapes in Chile
Combining high throughput genotyping and phenotyping for the genetic improvement of table grapes in Chile Pablo Cid, Inti Pedroso, Miguel García, Omar Essaú, Tim Kok and Paola Barba Instituto de investigaciones
Factors influencing growth performance and estimation of genetic parameters in crossbred pigs
IOSR Journal of Agriculture and Veterinary Science (IOSR-JAVS e-issn: -, p-issn: -.Volume, Issue (Nov. - Dec., PP - Factors influencing growth performance and estimation of genetic parameters in crossbred
JUNIOR LIVESTOCK > 3 - STEERS RING C > 1 - LIGHT JUNIOR LIVESTOCK > 3 - STEERS RING C > 1 - LIGHT JUNIOR LIVESTOCK > 3 - STEERS RING C > 2B - MEDIUM
Steers Ring C Results Ramey Turner Nina Gonzales Whitewright, ABC ABC Aven Horn Anson, ABC Michael Mills Aledo, Tx ABC Baylea Davis Anna, Brahman Sterling Pieniazek Denton, Brahman Brooke Kelly Brahman
4-H Consumer Dairy Project Manual
4-H Consumer Dairy Project Manual This manual belongs to: Club: Purdue Extension Floyd County 3000 Technology Avenue, Ste. L2110 New Albany, IN 47150 (812)948-5470 4-H Consumer Dairy Dairy Cattle bred
Activity 10. Coffee Break. Introduction. Equipment Required. Collecting the Data
. Activity 10 Coffee Break Economists often use math to analyze growth trends for a company. Based on past performance, a mathematical equation or formula can sometimes be developed to help make predictions
Jonathan H. Crane, Tropical Fruit Crop Specialist and Wanda Montas, Sr. Biologist
Jonathan H. Crane, Tropical Fruit Crop Specialist and Wanda Montas, Sr. Biologist 5-15-14 University of Florida, IFAS Tropical Research and Education Center Homestead, FL » Michael J. Davis, Plant Pathologist
2017 Application for Use of Certified Vegan Logo Trademark
We only accept applications from the US, Canada, Australia, New Zealand and US Territories 2017 Application for Use of Certified Vegan Logo Trademark The following company seeks permission to use the Certified
Europe- 2. How did the nobles in Europe gain their wealth?
Name Period Video: America Before Columbus Date 1. What types of natural wealth were in the Americas before Europeans arrived? Europe- 2. How did the nobles in Europe gain their wealth? What problem has
Mapping and Detection of Downy Mildew and Botrytis bunch rot Resistance Loci in Norton-based Population
Mapping and Detection of Downy Mildew and Botrytis bunch rot Resistance Loci in Norton-based Population Chin-Feng Hwang, Ph.D. State Fruit Experiment Station Darr College of Agriculture Vitis aestivalis-derived
Genetic diversity of wild Coffee (Coffea arabica) and its implication for conservation
Genetic diversity of wild Coffee (Coffea arabica) and its implication for conservation Kassahun Tesfaye, Feyera Senbeta, Tamiru Oljira, Solomon Balemi, Govers, K., Endashaw Bekele, Borsch, T. Biodiversity
Reniform Resistance from Texas Day Neutral Lines
Reniform Resistance from Texas Salliana R. Stetina Research Plant Pathologist Crop Genetics and Production Research Unit Stoneville, MS Cultural and Genetic Methods to Manage Reniform Nematode in Cotton
3 RD AUTUMN CATALOGUED SHOW & SALE OF 383 SUCKLED CALVES
EXETER LIVESTOCK CENTRE FRIDAY 17 TH NOVEMBER 2017 11.30am Ring 2 3 RD AUTUMN CATALOGUED SHOW & SALE OF 383 SUCKLED CALVES Kindly sponsored by:- Judge:- Mr Ian Dennis of Totnes EXETER LIVESTOCK CENTRE
PROBATION AND FOUNDATION PLOT PRODUCTION OF CANOLA, MUSTARD, RADISH, RAPESEED, SAFFLOWER, AND SUNFLOWER
SECTION 13 PROBATION AND FOUNDATION PLOT PRODUCTION OF CANOLA, MUSTARD, RADISH, RAPESEED, SAFFLOWER, AND SUNFLOWER In this Section: Canola and Rapeseed includes spring and winter varieties of Brassica
Animal Science Department, University of Nebraska-Lincoln
Title: BACON STUDY - PHASE II NPB #00-147 Investigator: Institution: Dr. Roger W. Mandigo, Professor Animal Science Department, University of Nebraska-Lincoln Date Submitted: 9/30/2004 Introduction: The
2018 Production Bull Sale
2018 Production Bull Sale Thursday, March 8, 2018 1:00 P.M. J.S. Bridwell Ag Center Wichita Falls, TX Sponsored By: AUCTIONEER RINGMEN SALE MANAGER SALE COORDINATOR SALE CLERK Bruce Miller Taos Dale David
OFFERING BREEDING AGE CHAROLAIS & ANGUS BULLS
OFFERING BREEDING AGE CHAROLAIS & ANGUS BULLS CHAROLAIS BULLS 1 BRACEWELL CATTLE, LLC. BRADLEY, LACI, RYLI & BRODY BRACEWELL cell. 940-230-3265 email. bradley@bracewellcattle.com web. bracewellcattle.com
Guidance Note. Validation and verification of the 3.7 OTC - Commodities Sheet. Relevant to the JFSC s prudential reporting requirements of JIBs
Guidance Note Validation and verification of the 3.7 OTC - Commodities Sheet Relevant to the JFSC s prudential reporting requirements of JIBs Issued: December 2018 Revised February 2019, to correct name
Randy Nelson Ram Singh
Public Soybean Breeding Research in a Private Variety World Brian Diers Randy Nelson Ram Singh Stella Kantartzi t Outline Why public soybean breeding programs are needed. Variety release and breeding research
Brazil Milk Cow Numbers and Milk Production per Cow,
TABLE OF CONTENTS 1. Brazil 1.1. Brazil Milk Market Introduction 1.1.1. Brazil Cow Milk Market Production and Fluid Milk Consumption by Volume, 1.1.2. Brazil Milk Cow Numbers and Milk Production per Cow,
4. The code of federal regulations stipulates that whole milk must contain 3.25% fat and % solids non-fat. a b c d. 10.
2017 MN FFA Milk Quality and Products Exam Milk Marketing 1. The demand function is the relationship between quantity purchased and a. quantity purchased b. quantity sold c. gross income d. price 2. A
414 Cattle Sold This Week Sheep Sold This Week
Market Report for Week Ending 2nd March 2016 414 Cattle Sold This Week Young Bulls to 227.5p - 1656.12 Cull Cows to 194.5p - 1496.11 Steers to 234.5p - 1364.27 Heifers to 259.5p - 1423.33 5136 Sheep Sold
What is Canola? Basic Canola Agronomics. Heath Sanders Canola Field Specialist Great Plains Canola Assoc. March 31 st 2014
What is Canola? Basic Canola Agronomics Heath Sanders Canola Field Specialist Great Plains Canola Assoc. March 31 st 2014 1 Great Plains Canola Association GPCA is a membership organization providing research
Confectionary sunflower A new breeding program. Sun Yue (Jenny)
Confectionary sunflower A new breeding program Sun Yue (Jenny) Sunflower in Australia Oilseed: vegetable oil, margarine Canola, cotton seeds account for >90% of oilseed production Sunflower less competitive
PROJECTS FUNDED BY THE SOUTHERN REGION SMALL FRUIT CONSORTIUM FOR 2011
PROJECTS FUNDED BY THE SOUTHERN REGION SMALL FRUIT CONSORTIUM FOR 2011 Title: Determination of Flower Type and Other Traits in Muscadine Grape Using Molecular Markers Final or Progress Report(Indicate
EAT ACCORDING TO YOUR GENES. NGx-Gluten TM. Personalized Nutrition Report
EAT ACCORDING TO YOUR GENES NGx-Gluten TM Personalized Nutrition Report Introduction Hello Caroline: Nutrigenomix is pleased to provide you with your NGx-Gluten TM Personalized Nutrition Report based on
2017 Application for Use of Certified Vegan Logo Trademark
VEGAN AWARENESS FOUNDATION We only accept applications from the US, Canada, Australia, New Zealand and US Territories 2017 Application for Use of Certified Vegan Logo Trademark The following company seeks
Mexico Milk Cow Numbers and Milk Production per Cow,
TABLE OF CONTENTS 1. Mexico 1.1. Mexico Milk Market Introduction 1.1.1. Dairy Market Structure and Supply Chain in Mexico 1.1.2. Mexico Cow Milk Market Production and Fluid Milk Consumption by Volume,
Case study on the effects of compost tea on soil & pasture
Case study on the effects of compost tea on soil & pasture Nar Nar Goon 2017 The Story: The application of compost tea and its effect on soil and pasture Name: Alison Livermore and John Murphy Farm: Nar
Kiwifruit Breeding & Genomics
Kiwifruit Breeding & Genomics Luis Gea, Breeding & Genomics Genetics for productivity» 3-4 years to flowering» 10 years breeding to production cycle» Progeny test + RRS» Backcross / inbreeding /sex Genetics
ASSEMBLY, No. 502 STATE OF NEW JERSEY. 218th LEGISLATURE PRE-FILED FOR INTRODUCTION IN THE 2018 SESSION
ASSEMBLY, No. 0 STATE OF NEW JERSEY th LEGISLATURE PRE-FILED FOR INTRODUCTION IN THE 0 SESSION Sponsored by: Assemblyman JOHN DIMAIO District (Hunterdon, Somerset and Warren) Co-Sponsored by: Assemblymen
454 CATTLE SOLD THIS WEEK
Week Ending 14 th March 2018 454 CATTLE SOLD THIS WEEK Pedigree Lincoln Red Bulls to 8000Gns Pedigree Lincoln Red Heifers to 2800Gns Pedigree Aberdeen Angus Bulls to 5000Gns Pedigree Simmental Heifers
2,991 SHEEP SOLD THIS WEEK New Season Lambs to 300p Hogget s to 270p Cull Ewes to
Week Ending 30 th May 2018 572 CATTLE SOLD THIS WEEK Cows & Calves to 2500.00 Store Heifers to 1000.00 Feeding Cows to 171.5p - 1261.28 Young Bulls to 246.5-1824.30 OTMS to 220.5p - 1663.83 Steers to 245.5p
Research Background: Weedy radish is considered one of the world s
Fast weeds in farmer's fields Featured scientists: Ashley Carroll from Gull Lake Middle School and Jeff Conner from the Kellogg Biological Station at Michigan State University Research Background: Weeds
GENETICS AND EVOLUTION OF CORN. This activity previews basic concepts of inheritance and how species change over time.
GENETICS AND EVOLUTION OF CORN This activity previews basic concepts of inheritance and how species change over time. Objectives for Exam #1: 1. Describe and complete a monohybrid ( one trait ) cross of
Total cheese output (excluding cottage cheese) was 1.09 billion pounds, 2.6 percent above December 2016 and 3.0 percent above November 2017.
Dairy Products ISSN: 949-0399 Released February, 208, by the National Agricultural Statistics Service (NASS), Agricultural Statistics Board, United States Department of Agriculture (USDA). Highlights Total
2016 Progress on Transferring Sclerotinia Resistance Genes from Wild Helianthus Species into Cultivated Sunflower
2016 Progress on Transferring Sclerotinia Resistance Genes from Wild Helianthus Species into Cultivated Sunflower Zhao Liu (NDSU) PI: Dr. Chao-Chien Jan (USDA-ARS, NCSL) Co-PI: Gerald J. Seiler (USDA-ARS,
Discrimination of Ruiru 11 Hybrid Sibs based on Raw Coffee Quality
Discrimination of Ruiru 11 Hybrid Sibs based on Raw Coffee Quality Gichimu B.M.*, Gichuru E.K., Mamati G.E. & Nyende A.B. *Coffee Research Foundation P.O. Box 4 00232, Ruiru, Kenya Presented during the
Resource Round-up. Standards of Learning Science: 3.10, 3.11, 4.9 Social Studies: 2.7
Resource Round-up Standards of Learning Science: 3.10, 3.11, 4.9 Social Studies: 2.7 Objective Students will: Identify and match plants and the crop produced Identify and match animals and the raw commodity
Shop for Healthy Groceries
TOOLKIT #5 LESSON PLAN: Healthy Grocery Shopping 1 Shop for Healthy Groceries with the Super Crew! Grades: K-5 Designed by: SuperKids Nutrition Inc. in partnership with the American Institute for Cancer
HAY ON WYE MARKET. Powys SALE OF STORE CATTLE SALE AT AM. Pre-Sale enquiries please contact: BRIGHTWELLS
HAY ON WYE MARKET Powys MONDAY 19 th MARCH 2018 SALE OF 75 STORE CATTLE SALE AT 11.30 AM Pre-Sale enquiries please contact: BRIGHTWELLS 01982 553614 Out of Office Hours: Chris Davies 07813 644303 Market
FEBRUARY Santa Barbara COUPONS. Look inside & SAVE TODAY!
FEBRUARY 2010 Santa Barbara COUPONS Look inside & SAVE TODAY! 2 WEDNESDAY, FEBRUARY 3, 2010 Nails SpaPedicure FacialTreatments Waxing Massage EyelashExtensions Complete Car Care The Way You Want It. Family
The Complaints Board ruled to Not Uphold the complaint in part and to Settle the complaint in part.
COMPLAINT NUMBER 16/296 COMPLAINANT ADVERTISER ADVERTISEMENT T. Swan The Cream The Cream Website and FAQ Factsheet DATE OF MEETING 13 September 2016 OUTCOME Not Upheld in part/ Settled in part SUMMARY
BATURIN S.O., KUZNETSOVA
1...,.. - (Fragaria x ananassa Duch.) //. 2010.. 14, 1.. 165-171. 2...,.. - Fragaria x Potentilla ( Frel) // -. 2011.. 15, 4.. 800 807. 3... Fragaria x ananassa Duch..... 2012. 16. 4... -. :, 2000.. 28
Sowing and Saving Seeds Year Round
Sowing and Saving Seeds Year Round Andy Waltke, M.S. Creighton University Common Soil Seed Library Lecture Series Intro to Seeds People have been collecting, growing and saving seeds for thousands of years.