Sangvichien, Hawksworth & Whalley
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1 Sangvichien, Hawksworth & Whalley Table S1. Complete list of lichen collections tested, ascospores discharged, ascospores germinated, and colonies. The classification follows Lumbsch & Huhndorf (2010). Colony development : 0 = none, 1 = poor, 2 = moderate, 3 = good. Family Species Locality code and collection Ascospores discharged Ascospore germinated Arthoniales Arthoniaceae Arthothelium sp. KY Roccellaceae Chiodecton leptosporum KY Baeomycetales Baeomycetaceae Baeomyces sp. VN 1 0 Baeomyces sp. VN 2 0 Dothideomycetes Arthopyreniaceae Arthopyrenia sp. SP 14 0 incertae sedis Lecanorales Cladoniaceae Cladonia submultiformis KY 117, 118, Crocyniaceae Crocynia pyxinoides KY 38 0 Haematomataceae Haematomma puniceum KY 107, H. wattii CM Haematomma sp. 1 KY Haematomma sp. 2 VN3 0 Haematomma sp. 3 VN4 0 Haematomma sp. 4 CM 28 0 Lecanoraceae Lecanora cenisea SP 4,5 1 L. fucescens KY L. fucescens CM 4 1 L. leprosa SP 3, L. pallida CM 19 0 L. polytropa KY L. varia CM 13 0 Lecanora sp. 1 KY Lecanora sp. 2 KY Lecanora sp. 3 KY Lecanora sp. 4 VN 11 0 Lecanora sp. 5 CAM 2 0 Lecanora sp. 6 KY Lecanora sp. KY Lecanora sp. KY 45 0 Lecanora sp. KY Pyrrhospora sp. 1 PKD Pyrrhospora sp. 1 CR 8 0 Pyrrhospora sp. 2 KY Parmeliaceae Bulbothrix isidiza KY 72 0 Everniastrum cirrhatum CM 2 0 Hypotrachyna sp. KY Parmelina sp. CM Parmotrema explanata KY 18 0 Parmotrema merrillii KY Parmotrema overreemii CM P. overreemii KY 20 1 P. poolii KY 22 0 Parmotrema sp. 1 CM Parmotrema sp. 2 KY S1
2 Tropical lichen fungi: ascospore discharge and culture Lecanoromycetes incertae sedis Lecanoromycetidae incertae sedis Family Species Locality code Ascospores Ascospore and collection discharged germinated Parmotrema sp. 3 KY Parmotrema sp. 4 KY 56 0 Parmotrema sp. 5 KY Parmotrema sp. 6 KY Parmotrema sp. 7 KY Parmotrema sp. 8 KY Parmotrema sp. 9 KY Parmotrema sp. 10 KY Parmotrema sp. 11 KY Relicina sublimbata CAM 1 0 Relicinopsis intertexta KY 85 0 Relicinopsis sp. 1 KY Relicinopsis sp. 2 KY Relicinopsis sp. 3 KY Relicinopsis sp. 4 KY Relicinopsis sp. CM 32 0 Usnea baileyi KY U. complanata CM Usnea sp. 2 KY Usnea sp. 3 KY Usnea sp. 4 KY Parmeliaceae sp. 1 KY Parmeliaceae sp. 2 KY 11 1 Pilocarpaceae Byssoloma leucobelpharum VN Fellhanera mastothallina VN 12 0 Psilolechia massal KY Sporopodium argillaceum VN Ramalinaceae Bacidia subannexa SP Bacidia sp. 1 SP Ramalina sp. KY Incertae sedis Eschatogonia sp. KY Brigantiaeaceae Brigantiaea leucoxantha CM Brigantiaea sp. KY 46 0 Brigantiaea sp. KY 88 0 Brigantiaea sp. KY Brigantiaea sp. KY 28 0 Brigantiaea sp. KY 51 0 Fuscideaceae Maronea manipurensis KY Lecideaceae Lecidea fuscoatra KY Lecidea sp. 1 KY Lecidea sp. 2 KY Ostropales Coenogoniaceae Coenogonium sp. KY 76 0 Coenogonium sp. 2 KY77 0 Coenogonium sp. 3 KY149 0 volume 2 no S2
3 Sangvichien, Hawksworth & Whalley Family Species Locality code and collection Ascospores discharged Ascospore germinated Coenogonium sp. 4 VN 14 0 Graphidaceae Cyclographina sp. 9 KJB 7, Cyclographina sp.2 RPB Glyphis cicatricosa KJB G. cicatricosa KY Graphidaceae sp. KY G. cicatricosa SP Graphina albissima KJB G. vestita KJB 10, G. cleistoblephara KY G. hiascens KY G. vestitoides CR 2 0 Graphina sp. 1 KY Graphina sp. 2 KY Graphina sp. 3 CM Graphina sp. 5 KY Graphina sp. 9 KY 124, Graphina sp.10 KY Graphina sp.18 KY Graphina sp.19 KY Graphina sp. 20 KY Graphis afzelii CR G. afzelii KY G. albocolpata KY G. analoga HKK G. apertella SP 2 0 G. apertella HKK G. dumastioides KY 26 0 G. elegans KY G. kakaduensis TS 3 0 G. librata RPB G. rigidula KY G. rimulosa CR G. rimulosa KJB G. rimulosa SP 1, G. xanthospora TS 2 0 Graphis sp.3 KJB 1, 4, Graphis sp.10 KY Graphis sp. KY Graphis sp. KY Graphis sp. KY Graphis sp. KY Graphis sp. KY Graphis sp. KY Graphis sp. KY S3
4 Tropical lichen fungi: ascospore discharge and culture Family Species Locality code and collection Ascospores discharged Ascospore germinated Graphis sp. KY Graphis sp. KY Graphis sp. KY Gyrostromum sp. KY Myriotrema rugiterum KY 70 0 Myriotrema sp. KY 87 0 Myriotrema sp. KY 89 0 Ocellularia neopertusariformis KY Ocellularia sp. 1 KY Ocellularia sp. 2 KY Ocellularia sp. 3 KY Ocellularia sp. 4 KY Ocellularia sp. 5 KY 74 0 Ocellularia sp. 6 SP Phaeographina caesioradians TS P. chrysentera CR P. pyrrhochroa PKD P. quassiaecola VN Phaeographina sp.2 KJB Phaeographina sp. 4 RPB Phaeographina sp. CAM Phaeographis KY 121, melanostalazans Phaeographis sp. 27 KY Sarcographa actinobola KY S. labyrinththica KY Thelotrema sp. 6 VN 9, Thelotrema s. lat. sp. 1 KY Thelotrema s. lat. sp. 2 KY Thelotrema s. lat. sp. 3 KY Thelotrema s. lat. sp. 4 KY Thelotrema s. lat. sp. 5 KY Porinaceae Clathroporina sp. KY181 0 Porina mastoidea KY 84 0 Porina sp. 1 KY Porina sp. 2 KY Porina sp. 3 VN 13 0 Peltigerales Nephromataceae Nephroma sp. CM Pertusariales Pertusariaceae Pertusaria sp. 1 KY Pertusaria sp. 2 KY Pertusaria sp. 3 KY Pertusaria sp. 4 PKD Pertusaria sp. 5 VN 5 0 Pertusaria sp. 6 VN 7 0 Pertusaria sp. 7 VN 8 0 volume 2 no S4
5 Sangvichien, Hawksworth & Whalley Family Species Locality code and collection Ascospores discharged Ascospore germinated Pezizomycotina Aspidotheliaceae Aspidothelium sp. CM 9 0 incertae sedis Pyrenulales Pyrenulaceae Anthracothecium himalayense KY 25, 42 0 Anthracothecium sp. 1 KY Anthracothecium sp. 2 KY Anthracothecium sp. 3 KY Anthracothecium sp. 4 KY Anthracothecium sp. 5 KY Pyrenula anomada KY 17 0 P. macrocarpa KY P. mamillana KY Pyrenula sp. 1 KY Pyrenula sp. 2 KY 62 0 Pyrenula sp. 3 KY 83 0 Pyrenula sp. 4 KY 86 0 Pyrenula sp. 5 KY Pyrenula sp. 6 KY Pyrenula sp. 7 KY Pyrenula sp. 8 KY Pyrenula sp. 9 KY Pyrenula sp. 10 KY Pyrenula sp. 11 KY Pyrenula sp. 12 KY Pyrenula sp. 13 KY Pyrenula sp. 14 KY Pyrenula sp. 15 KY Teloschistales Letrouitiaceae Letrouitia transgressa KY L. tricolor CM 7 0 L. vulpina KY Letrouitia sp. KY 27 0 Physciaceae Buellia montana KY 30 0 Buellia sp. 1 KY 31 0 Buellia sp. 2 KY 39 0 Buellia sp. 3 KY 43 0 Buellia sp. 4 KY Buellia sp. 5 KY Calicium sp. KY Dirinaria applanata KY 37 0 D. confluens CM Dirinaria sp. 1 KY 50 0 Dirinaria sp. 2 KY 65 0 Dirinaria sp. 3 KY Dirinaria sp.4 KY Heterodermia diademata CM 8 0 H. diademata KY S5
6 Tropical lichen fungi: ascospore discharge and culture Family Species Locality code and collection Ascospores discharged Ascospore germinated H. diademata KY 134, H. lepidota CM 24 0 Heterodermia sp. 1 CM1 0 Heterodermia sp. 2 CM3 0 Heterodermia sp. 3 CM5 0 Heterodermia sp. 4 CM Heterodermia sp 5 CM Heterodermia sp. 6 CM21 0 Heterodermia sp. 7 CM22 0 Heterodermia sp. 8 KY 2 0 Heterodermia sp. 9 KY 3 0 Heterodermia sp. 10 KY 4 0 Heterodermia sp. 11 KY Heterodermia sp. 12 KY Heterodermia sp. 13 KY 12 0 Heterodermia sp. 14 KY Heterodermia sp. 15 KY 32 0 Heterodermia sp. 16 KY 54 0 Heterodermia sp.17 KY Heterodermia sp. 18 KY Heterodermia sp. 19 CAM Pyxine cocoes KY 13 0 Pyxine sp. 1 CM 20 0 Pyxine sp. 2 KY 10 0 Pyxine sp. 3 KY 34 0 Pyxine sp. 4 KY Rinodina sp. KY Physciaceae sp. 1 KY Teloschistaceae Caloplaca sp. CR 6 1 Trypetheliales Trypetheliaceae Campylothelium sp. SKR Laurera bengualensis KY L. bengualensis KY 61, L. bengualensis KY L. bengualensis KY L. madreporiformis KY L. madreporiformis KY 222, L. megasperma KY L. meristospora CM L. meristospora KY L. subdiscreta SKR Polymeridium albocinereum PKD Pseudopyrenula diluta KY Pseudopyrenula sp. KY Trypethelium eluteriae CM T. eluteriae KY 63, 64, volume 2 no S6
7 Sangvichien, Hawksworth & Whalley Family Species Locality code and collection Ascospores discharged Ascospore germinated T. eluteriae KY T. eluteriae KY T. ochroleucum KY 235, T. tropicum KY Trypethelium sp. 1 KY Trypethelium sp. 2 KY Trypethelium sp. 3 KY Trypethelium sp. 4 KY 98 0 Trypethelium sp. 5 KY 99 0 Trypethelium sp. 6 KY Trypethelium sp. 7 KY Trypethelium sp. 8 KY Trypethelium sp. 9 KY Trypethelium sp. 10 KY Trypethelium sp. 11 KY Trypetheliaceae sp. 1 KY Trypetheliaceae sp. 2 KY Incertae sedis Incertae sedis Unidentified KY Unidentified KY S7
8 Runge et al. Table S1. GenBank accession numbers for the sequences used in the present study. glyceraldehyde-3-phosphate dehydrogenase gene 28S ribosomal DNA gene enolase gene heat shock protein 90 gene elongation factor 1 alpha gene beta-tubulin gene Species Isolate a 60S ribosomal protein L10 gene Phytophthora alni P10568 EU EU EU EU EU EU EU Phytophthora andina P13365 EU EU EU EU EU EU EU Phytophthora arecae P10213 EU EU EU EU EU EU EU Phytophthora asparagi P10690 EU EU EU EU EU EU EU Phytophthora asparagi P10705 EU EU EU EU EU EU EU Phytophthora bisheria P1620 EU EU EU EU EU EU EU Phytophthora bisheria P10117 EU EU EU EU EU EU EU Phytophthora boehmeriae P6950 EU EU EU EU EU EU EU Phytophthora botryosa P6945 EU EU EU EU EU EU EU Phytophthora brassicae P10414 EU EU EU EU EU EU EU Phytophthora brassicae P10153 EU EU EU EU EU EU EU Phytophthora brassicae P10154 EU EU EU EU EU EU EU Phytophthora cactorum P0714 EU EU EU EU EU EU EU Phytophthora cactorum P0715 EU EU EU EU EU EU EU Phytophthora cajani P3105 EU EU EU EU EU EU EU Phytophthora cambivora P0592 EU EU EU EU EU EU EU Phytophthora capsici P0253 EU EU EU EU EU EU EU Phytophthora capsici P10735 EU EU EU EU EU EU EU Phytophthora capsici P1314 EU EU EU EU EU EU EU Phytophthora capsici P0630 EU EU EU EU EU EU EU Phytophthora capsici P10452 EU EU EU EU EU EU EU Phytophthora capsici P10386 EU EU EU EU EU EU EU Phytophthora capsici P1319 EU EU EU EU EU EU EU Phytophthora captiosa P10719 EU EU EU EU EU EU EU Phytophthora cinnamomi P2159 EU EU EU EU EU EU EU Phytophthora cinnamomi P8495 EU EU EU EU EU EU EU Phytophthora citricola P7902 EU EU EU EU EU EU EU Phytophthora citrophthora P6310 EU EU EU EU EU EU EU Phytophthora clandestina P3942 EU EU EU EU EU EU EU Phytophthora colocasiae P6317 EU EU EU EU EU EU EU Phytophthora cryptogea P1088 EU EU EU EU EU EU EU Phytophthora cuyabensis P8218 EU EU EU EU EU EU EU S1
9 High degree of paraphyly in Phytophthora glyceraldehyde- 3-phosphate dehydrogenase gene 28S ribosomal DNA gene enolase gene heat shock protein 90 gene elongation factor 1 alpha gene beta-tubulin gene Species Isolate a 60S ribosomal protein L10 gene Phytophthora cuyabensis P8224 EU EU EU EU EU EU EU Phytophthora drechsleri P10331 EU EU EU EU EU EU EU Phytophthora erythroseptica P10382 EU EU EU EU EU EU EU Phytophthora erythroseptica P1699 EU EU EU EU EU EU EU Phytophthora erythroseptica P10385 EU EU EU EU EU EU EU Phytophthora europaea P10324 EU EU EU EU EU EU EU Phytophthora fallax P10725 EU EU EU EU EU EU EU Phytophthora foliorum P10969 EU EU EU EU EU EU EU Phytophthora fragariae P3821 EU EU EU EU EU EU EU Phytophthora glovera P10619 EU EU EU EU EU EU EU Phytophthora gonapodyides P10337 EU EU EU EU EU EU EU Phytophthora hedraiandra P11056 EU EU EU EU EU EU EU Phytophthora heveae P10167 EU EU EU EU EU EU EU Phytophthora hibernalis P3822 EU EU EU EU EU EU EU Phytophthora humicola P3826 EU EU EU EU EU EU EU Phytophthora idaei P6767 EU EU EU EU EU EU EU Phytophthora ilicis P3939 EU EU EU EU EU EU EU Phytophthora infestans P10650 EU EU EU EU EU EU EU Phytophthora infestans P10651 EU EU EU EU EU EU EU Phytophthora inflata P10341 EU EU EU EU EU EU EU Phytophthora insolita P6195 EU EU EU EU EU EU EU Phytophthora insolita P6703 EU EU EU EU EU EU EU Phytophthora inundata P8478 EU EU EU EU EU EU EU Phytophthora ipomoeae P10225 EU EU EU EU EU EU EU Phytophthora ipomoeae P10226 EU EU EU EU EU EU EU Phytophthora ipomoeae P10227 EU EU EU EU EU EU EU Phytophthora iranica P3882 EU EU EU EU EU EU EU Phytophthora katsurae P10187 EU EU EU EU EU EU EU Phytophthora katsurae P3389 EU EU EU EU EU EU EU Phytophthora kelmania P10613 EU EU EU EU EU EU EU Phytophthora kernoviae P10681 EU EU EU EU EU EU EU Phytophthora lagoariana P8223 EU EU EU EU EU EU EU volume 2 no S2
10 Runge et al. glyceraldehyde- 3-phosphate dehydrogenase gene 28S ribosomal DNA gene enolase gene heat shock protein 90 gene elongation factor 1 alpha gene beta-tubulin gene Species Isolate a 60S ribosomal protein L10 gene Phytophthora lagoariana P8618 EU EU EU EU EU EU EU Phytophthora lateralis P3888 EU EU EU EU EU EU EU Phytophthora P10267 EU EU EU EU EU EU EU macrochlamydospora Phytophthora meadii P6128 EU EU EU EU EU EU EU Phytophthora medicaginis P10683 EU EU EU EU EU EU EU Phytophthora megakarya P8516 EU EU EU EU EU EU EU Phytophthora megasperma P3136 EU EU EU EU EU EU EU Phytophthora melonis P10994 EU EU EU EU EU EU EU Phytophthora mexicana P0646 EU EU EU EU EU EU EU Phytophthora mirabilis P3005 EU EU EU EU EU EU EU Phytophthora multivesiculata P10410 EU EU EU EU EU EU EU Phytophthora multivesiculata P10327 EU EU EU EU EU EU EU Phytophthora nemorosa P10288 EU EU EU EU EU EU EU Phytophthora nicotianae P6303 EU EU EU EU EU EU EU Phytophthora nicotianae P10802 EU EU EU EU EU EU EU Phytophthora nicotianae P10116 EU EU EU EU EU EU EU Phytophthora nicotianae P1452 EU EU EU EU EU EU EU Phytophthora nicotianae P7146 EU EU EU EU EU EU EU Phytophthora nicotianae P10318 EU EU EU EU EU EU EU Phytophthora niederhauserii P10617 EU EU EU EU EU EU EU Phytophthora palmivora P0255 EU EU EU EU EU EU EU Phytophthora palmivora P0113 EU EU EU EU EU EU EU Phytophthora phaseoli P10145 EU EU EU EU EU EU EU Phytophthora phaseoli P10150 EU EU EU EU EU EU EU Phytophthora polonica P15001 EU EU EU EU EU EU EU Phytophthora polonica P15005 EU EU EU EU EU EU EU Phytophthora polonica P15004 EU EU EU EU EU EU EU Phytophthora porri P10728 EU EU EU EU EU EU EU Phytophthora porri P6207 EU EU EU EU EU EU EU Phytophthora primulae P10333 EU EU EU EU EU EU EU Phytophthora primulae P10220 EU EU EU EU EU EU EU Phytophthora primulae P10224 EU EU EU EU EU EU EU S3
11 High degree of paraphyly in Phytophthora glyceraldehyde- 3-phosphate dehydrogenase gene 28S ribosomal DNA gene enolase gene heat shock protein 90 gene elongation factor 1 alpha gene beta-tubulin gene Species Isolate a 60S ribosomal protein L10 gene Phytophthora P10437 EU EU EU EU EU EU EU pseudosyringae Phytophthora pseudotsugae P10339 EU EU EU EU EU EU EU Phytophthora psychrophila P10433 EU EU EU EU EU EU EU Phytophthora quercetorum MD9-2 EU EU EU EU EU EU EU Phytophthora quercina P10334 EU EU EU EU EU EU EU Phytophthora quercina P10441 EU EU EU EU EU EU EU Phytophthora ramorum P10301 EU EU EU EU EU EU EU Phytophthora richardiae P10811 EU EU EU EU EU EU EU Phytophthora richardiae P10359 EU EU EU EU EU EU EU Phytophthora richardiae P10355 EU EU EU EU EU EU EU Phytophthora richardiae P7788 EU EU EU EU EU EU EU Phytophthora sansomea P3163 EU EU EU EU EU EU EU Phytophthora sinensis P1475 EU EU EU EU EU EU EU Phytophthora sojae P3114 EU EU EU EU EU EU EU Phytophthora sp. P10417 EU EU EU EU EU EU EU Phytophthora sp. P10672 EU EU EU EU EU EU EU Phytophthora sp. P8619 EU EU EU EU EU EU EU Phytophthora syringae P10330 EU EU EU EU EU EU EU Phytophthora tentaculata P8497 EU EU EU EU EU EU EU Phytophthora trifolii P7010 EU EU EU EU EU EU EU Phytophthora tropicalis P10329 EU EU EU EU EU EU EU Phytophthora uliginosa P10328 EU EU EU EU EU EU EU Phytophthora vignae P3019 EU EU EU EU EU EU EU Pythium undulatum P10342 EU EU EU EU EU EU Pythium vexans P3980 EU EU EU EU EU EU Hyaloperonospora Genome arabidopsidis Pseudoperonospora Genome AY cubensis a Local identification numbers from the World Phytophthora Genetic Resource Collection (P) and West Virginia University (MD). volume 2 no S4
12 Runge et al Phytophthora infestans P a Phytophthora iranica P3882 1b Phytophthora nicotianae P Phytophthora cactorum P0714 1c Phytophthora quercina P Phytophthora palmivora P Phytophthora multivesiculata P Phytophthora bisheria P Phytophthora capsici P0253 2b Phytophthora humicola P Phytophthora nemorosa P Phytophthora katsurae P Phytophthora europaea P Phytophthora ramorum P Phytophthora polonica P Phytophthora captiosa P Phytophthora boehmeriae P Pseudoperonospora cubensis DM 0.01 Fig. S1. Bayesian analysis of the clade representatives used for the statistical tests for the topology of the grouping of the individual clades with posterior probability values. 71-S5
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